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Modeling of NETROPSIN and PROFLAVIN molecules and their components in the

Physical-chemical and medical-biological properties of Netropsin (NT) and Proflavine (PF)

Слайды и текст этой презентации

Слайд 1Modeling of NETROPSIN and PROFLAVIN molecules and their components in

the programm HyperChem
Performed by
student Д/м-19-1о
Chuyanova a.d.

Modeling of NETROPSIN and PROFLAVIN molecules and their components in the programm HyperChemPerformed by student Д/м-19-1оChuyanova a.d.

Слайд 2Physical-chemical and medical-biological properties of Netropsin (NT) and Proflavine (PF)

Physical-chemical and medical-biological properties of Netropsin (NT) and Proflavine (PF)

Слайд 3Building molecules of Netropsin (NT) and Proflavine (PF).

Building molecules of Netropsin (NT) and Proflavine (PF).

Слайд 4Optimization of molecules
Netropsin: E = 31,509668; RMS = 0,075803;
Proflavine: E

= 7,655725; RMS = 0,089366.

Optimization of moleculesNetropsin: E = 31,509668; RMS = 0,075803;Proflavine: E = 7,655725; RMS = 0,089366.

Слайд 5Table 1. – Value optimization energy for molecules of NETROPSIN

(NT) and PROFLAVINE (PF).

Table 1. – Value optimization energy for molecules of NETROPSIN (NT) and PROFLAVINE (PF).

Слайд 6Comparison spatial forms of molecule in a vacuum, in a

solution, in a complex
Solv and optim

Comparison spatial forms of molecule in a vacuum, in a solution, in a complex Solv and optim

Слайд 7Solv and bank

Solv and bank

Слайд 8Studying the properties of molecules. The charges of molecules

Studying the properties of molecules. The charges of molecules

Слайд 9Plotting different properties of a molecule
Graph of the charge density

of molecules

Plotting different properties of a molecule  Graph of the charge density of molecules

Слайд 10Graph electrostatic potential of molecules Netrospin (NT) and Proflavine (PV)

Graph electrostatic potential of molecules Netrospin (NT) and Proflavine (PV)

Слайд 11Netrospin (NT): 6,2702 (3,72431; -4,86833; 1,32067)
Proflavine (PF): 1,95123 (1,88099; -0,00991577;

0,518722).
Dipole moment of molecules Netrospin (NT) and Proflavine (NT)

Netrospin (NT): 6,2702 (3,72431; -4,86833; 1,32067)Proflavine (PF): 1,95123 (1,88099; -0,00991577; 0,518722).Dipole moment of molecules Netrospin (NT) and

Слайд 12Table 2. – Properties of molecules Netropsin (NT) and Proflavine

(PF).

Table 2. – Properties of molecules Netropsin (NT) and Proflavine (PF).

Слайд 13Analysis of molecular vibration, vibrational spectrum

Analysis of molecular vibration, vibrational spectrum

Слайд 14Construction of complexes self- and heteroassociative molecules

Construction of complexes self- and heteroassociative molecules

Слайд 17Calculating the energy of hydrophobic interactions and studying the behavior

dynamic of a molecular complex
G1 = 31,509668
G2 =

7,655725
G3 = 28,54897
ΔGмм = G 3 – (G1 + G2)
ΔGмм = 28,542897 - (31,509668 + 7,655725) = -10,622496
Calculating the energy of hydrophobic interactions and studying the behavior dynamic of a molecular complex  G1

Слайд 18АAB = 269,77 Aо
АA = 679,63 Aо
АВ = 393,35 Aо


ΔА = АAB - АA - АB
ΔА = 269,77

– 679,63 – 393,35 = -803,21 (Ао)

АAB = 269,77 AоАA = 679,63 AоАВ = 393,35 Aо ΔА = АAB - АA - АB

Слайд 19ΔGВДВ = γВДВ * ΔA
ΔGВДВ = (-38.8) * (

-803,21) = 31164,548 (кал/моль*Ао),
ΔGгф = γгф * ΔA
ΔGгф = 46

* ( -803,21) = -36947,66 (кал/моль*Ао)
ΔGсольв = ΔGВДВ + ΔGгф
ΔGсольв = (γВДВ + γгф) * ΔA = γ * ΔA = 7,2 * (-803,21) = -5783,112
ΔGВДВ = γВДВ * ΔA ΔGВДВ = (-38.8) * ( -803,21) = 31164,548 (кал/моль*Ао),ΔGгф = γгф *

Слайд 20During the research:
- The molecules of NETROPSIN (NT) and PROFLAVINE(PF)

were constructed ;
- Energies were calculated and structures of molecules

were optimized;
- Properties of molecules were investigated ;
- Complexes of self- and heteroassociative molecules were constructed.
During the research:- The molecules of NETROPSIN (NT) and PROFLAVINE(PF) were constructed ;- Energies were calculated and

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